cohfit.h File Reference

#include <stdio.h>
#include <unistd.h>
#include <gsl/gsl_errno.h>
#include "adata.h"
#include "msg.h"

Go to the source code of this file.

Classes
struct	avdata
struct	avgdatastore
struct	cosummary
struct	edatum
struct	examdata

Macros
#define	FALSE   0
#define	FITOPT_ALLFITS   (FITOPT_AMP_ALL|FITOPT_SNR_ALL)
#define	FITOPT_AMP_ALL   (FITOPT_AMP_PS|FITOPT_AMP_PO|FITOPT_AMP_SO)
#define	FITOPT_AMP_PO   0x02 /* do plateau-only fit */
#define	FITOPT_AMP_PS   0x01 /* do plateau-slope fit */
#define	FITOPT_AMP_SO   0x04 /* do slope-only fit */
#define	FITOPT_NDX_2P7   5 /* < NFITOPT */
#define	FITOPT_NDX_2P8   4 /* < NFITOPT */
#define	FITOPT_NDX_3PT   3 /* < NFITOPT */
#define	FITOPT_NDX_PO   1 /* < NFITOPT */
#define	FITOPT_NDX_PS   0 /* < NFITOPT */
#define	FITOPT_NDX_SO   2 /* < NFITOPT */
#define	FITOPT_NOFITS   0x00 /* do no fits */
#define	FITOPT_SNR_2P7   0x40 /* do GSL 2.7 cubic spline fit */
#define	FITOPT_SNR_2P8   0x20 /* do GSL 2.8 cubic spline fit */
#define	FITOPT_SNR_3PT   0x10 /* do 3-point SNR fit at max */
#define	FITOPT_SNR_ALL   (FITOPT_SNR_3PT|FITOPT_SNR_2P8|FITOPT_SNR_2P7)
#define	HAVEGSL2P7   0
#define	HAVEGSL2P8   0
#define	INCR_AVSP   100 /* increment for more */
#define	INIT_AVSP   500 /* avg data storage, initially */
#define	MAX_BNO   120 /* 20 stations */
#define	MAX_COTIME   392.0 /* historical limit */
#define	MAX_ITERS   100 /* max iterations */
#define	MAX_NSEGLEN   100 /* Fringex max -iarg MAXNSECS */
#define	MAX_TXT   80 /* pgplot labels */
#define	NFITOPT   6 /* number FITOPT bits */
#define	TRUE   1

Typedefs
typedef struct avdata	avg_data
typedef struct avgdatastore	avgspace
typedef struct cosummary	cosumary
typedef struct edatum	edatum
typedef struct examdata	examdata

Functions
char *	as_fit_ndx_nm (int)
char *	as_fit_nm_ndx (int, int *)
void	clear_codata (cosumary *)
void	clear_err_handler_report (void)
int	exam_edit (char *, examdata *)
void	exam_file (cosumary *, int, examdata *)
void	exam_gnuplot (examdata *)
int	fit_ampl (cosumary *, int, int)
void	fit_codata (cosumary *, examdata *)
int	fit_msnr (cosumary *, int)
char *	get_err_handler_report ()
int	get_gslegacy_default (void)
int	normalize_snr (cosumary *, int)
int	parse_cmdline (int, char **, FILE **, examdata *)
void	plot_codata (cosumary *)
int	read_data (avgspace *, char *, int *, int *)
void	set_gnuplot_opts (examdata *)
int	sort_data (avg_data *, int)
void	sorter (avg_data *, int)
int	write_codata (cosumary *, FILE *)

Variables
gsl_error_handler_t	err_handler

---

Class Documentation

avdata

struct avdata

Class Members
fringesum	fdata
int	keyval
int	lastorder
int	order

avgdatastore

struct avgdatastore

Class Members
avg_data *	data
int	space

cosummary

struct cosummary

Class Members
float	ampl[MAX_NSEGLEN]
double	ampl_cotime
int	bestamp
int	bestsnr
float	breakpoint
int	cbs_p2p7[3]
int	cbs_p2p8[3]
float	cohereloss
fringesum *	datum
int	didfits
int	examlen
char *	exampat
float	fit2p7[MAX_NSEGLEN]
float	fit2p8[MAX_NSEGLEN]
float	fitapo[MAX_NSEGLEN]
float	fitaps[MAX_NSEGLEN]
float	fitaso[MAX_NSEGLEN]
int	fitmask
float	fitsnr[MAX_NSEGLEN]
int	iteratio[NFITOPT]
int	labels
double	maxcotime
int	navg[MAX_NSEGLEN]
int	nsegtime
float	orig_srch
float	plateau
double	poerr[1]
double	popar[1]
double	pserr[3]
double	pspar[3]
float	redchisq[NFITOPT]
float	seglen[MAX_NSEGLEN]
float	slope
float	snr[MAX_NSEGLEN]
double	snr_cotime
int	snr_peak[3]
double	soerr[2]
double	sopar[2]

edatum

struct edatum

Class Members
double	ampl_cotime
double	ampmax
double	ampmin
int	bestampndx
int	bestsnrndx
int	bno
double	breakpoint
double	cohereloss
char *	examfile
char	frlabel[MAX_TXT]
double	lenmax
double	lenmin
double	plateau
double	poerr[1]
double	popar[1]
double	pserr[3]
double	pspar[3]
double	redchisq[NFITOPT]
double	slope
double	snr_cotime
double	snrmax
double	snrmin
double	soerr[2]
double	sopar[2]

examdata

struct examdata

Class Members
float	closs
int	customlimits
int	density
char *	devp
edatum	edata[MAX_BNO]
char *	edit
int	elen
char *	epat
int	fitmask
int	gnuplot
int	gpboldface
int	gpdashtype
int	gslegacy
int	labels
int	montage
double	mxcotime
int	nbno
int	pbno
char *	pdfile
int	rnc[2]

Macro Definition Documentation

FALSE

#define FALSE   0

FITOPT_ALLFITS

#define FITOPT_ALLFITS   (FITOPT_AMP_ALL|FITOPT_SNR_ALL)

FITOPT_AMP_ALL

#define FITOPT_AMP_ALL   (FITOPT_AMP_PS|FITOPT_AMP_PO|FITOPT_AMP_SO)

FITOPT_AMP_PO

#define FITOPT_AMP_PO   0x02 /* do plateau-only fit */

FITOPT_AMP_PS

#define FITOPT_AMP_PS   0x01 /* do plateau-slope fit */

FITOPT_AMP_SO

#define FITOPT_AMP_SO   0x04 /* do slope-only fit */

FITOPT_NDX_2P7

#define FITOPT_NDX_2P7   5 /* < NFITOPT */

FITOPT_NDX_2P8

#define FITOPT_NDX_2P8   4 /* < NFITOPT */

FITOPT_NDX_3PT

#define FITOPT_NDX_3PT   3 /* < NFITOPT */

FITOPT_NDX_PO

#define FITOPT_NDX_PO   1 /* < NFITOPT */

FITOPT_NDX_PS

#define FITOPT_NDX_PS   0 /* < NFITOPT */

FITOPT_NDX_SO

#define FITOPT_NDX_SO   2 /* < NFITOPT */

FITOPT_NOFITS

#define FITOPT_NOFITS   0x00 /* do no fits */

FITOPT_SNR_2P7

#define FITOPT_SNR_2P7   0x40 /* do GSL 2.7 cubic spline fit */

FITOPT_SNR_2P8

#define FITOPT_SNR_2P8   0x20 /* do GSL 2.8 cubic spline fit */

FITOPT_SNR_3PT

#define FITOPT_SNR_3PT   0x10 /* do 3-point SNR fit at max */

FITOPT_SNR_ALL

#define FITOPT_SNR_ALL   (FITOPT_SNR_3PT|FITOPT_SNR_2P8|FITOPT_SNR_2P7)

HAVEGSL2P7

#define HAVEGSL2P7   0

HAVEGSL2P8

#define HAVEGSL2P8   0

INCR_AVSP

#define INCR_AVSP   100 /* increment for more */

INIT_AVSP

#define INIT_AVSP   500 /* avg data storage, initially */

MAX_BNO

#define MAX_BNO   120 /* 20 stations */

MAX_COTIME

#define MAX_COTIME   392.0 /* historical limit */

MAX_ITERS

#define MAX_ITERS   100 /* max iterations */

MAX_NSEGLEN

#define MAX_NSEGLEN   100 /* Fringex max -iarg MAXNSECS */

MAX_TXT

#define MAX_TXT   80 /* pgplot labels */

NFITOPT

#define NFITOPT   6 /* number FITOPT bits */

TRUE

#define TRUE   1

Typedef Documentation

avg_data

typedef struct avdata avg_data

avgspace

typedef struct avgdatastore avgspace

cosumary

typedef struct cosummary cosumary

edatum

typedef struct edatum edatum

examdata

typedef struct examdata examdata

Function Documentation

as_fit_ndx_nm()

char* as_fit_ndx_nm

(

int

index

)

as_fit_nm_ndx()

char* as_fit_nm_ndx	(	int	flag,
		int *	index
	)

clear_codata()

void clear_codata

(

cosumary *

codata

)

clear_err_handler_report()

void clear_err_handler_report

(

void

)

exam_edit()

int exam_edit	(	char *	optarg,
		examdata *	exdp
	)

exam_file()

void exam_file	(	cosumary *	codatum,
		int	bno,
		examdata *	exdata
	)

exam_gnuplot()

void exam_gnuplot

(

examdata *

exdp

)

fit_ampl()

int fit_ampl	(	cosumary *	codatum,
		int	npt,
		int	gslegacy
	)

fit_codata()

void fit_codata	(	cosumary *	,
		examdata *
	)

fit_msnr()

int fit_msnr	(	cosumary *	codatum,
		int	npt
	)

get_err_handler_report()

char* get_err_handler_report

(

)

get_gslegacy_default()

int get_gslegacy_default

(

void

)

normalize_snr()

int normalize_snr	(	cosumary *	codatum,
		int	npt
	)

parse_cmdline()

int parse_cmdline	(	int	argc,
		char **	argv,
		FILE **	fpout,
		examdata *	exdp
	)

plot_codata()

void plot_codata

(

cosumary *

)

read_data()

int read_data	(	avgspace *	avgp,
		char *	filename,
		int *	navg,
		int *	nfails
	)

set_gnuplot_opts()

void set_gnuplot_opts

(

examdata *

exdp

)

sort_data()

int sort_data	(	avg_data *	data,
		int	navg
	)

sorter()

void sorter	(	avg_data *	data,
		int	navg
	)

write_codata()

int write_codata	(	cosumary *	codata,
		FILE *	fpout
	)

Variable Documentation

err_handler

gsl_error_handler_t err_handler

extern